diff --git a/public/scala/qscript/org/broadinstitute/sting/queue/qscripts/PacbioProcessingPipeline.scala b/public/scala/qscript/org/broadinstitute/sting/queue/qscripts/PacbioProcessingPipeline.scala
index 6f5dae2f8..1d3fb2622 100755
--- a/public/scala/qscript/org/broadinstitute/sting/queue/qscripts/PacbioProcessingPipeline.scala
+++ b/public/scala/qscript/org/broadinstitute/sting/queue/qscripts/PacbioProcessingPipeline.scala
@@ -177,7 +177,6 @@ class PacbioProcessingPipeline extends QScript {
   }
 
   case class analyzeCovariates (inRecalFile: File, outPath: String) extends AnalyzeCovariates {
-    this.resources = R
     this.recal_file = inRecalFile
     this.output_dir = outPath
     this.analysisName = queueLogDir + inRecalFile + ".analyze_covariates"