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Fixed comment

This commit is contained in:
Eric Banks 2011-08-10 12:07:43 -04:00
parent 06cdc4d5f9
commit c884b6bf1f
1 changed files with 2 additions and 7 deletions
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9
public/java/src/org/broadinstitute/sting/gatk/arguments/StandardVariantContextInputArgumentCollection.java
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@ -39,14 +39,9 @@ import org.simpleframework.xml.Root;
public class StandardVariantContextInputArgumentCollection { public class StandardVariantContextInputArgumentCollection {
/** /**
* The VCF input file(s) * The VCF file we are using.
* *
* The variant track can take any number of arguments on the command line. Each -V argument * Variants from this file are used by this tool as input.
* will be included as an input to the tool. If no explicit name is provided,
* the -V arguments will be named using the default algorithm: variant, variant2, variant3, etc.
* The user can override this by providing an explicit name -V:name,vcf for each -V argument,
* and each named argument will be labeled as such in the output (i.e., set=name rather than
* set=variant2). The order of arguments does not matter except for the naming.
*/ */
@Input(fullName="variant", shortName = "V", doc="Input VCF file", required=true) @Input(fullName="variant", shortName = "V", doc="Input VCF file", required=true)
public RodBinding<VariantContext> variants; public RodBinding<VariantContext> variants;