From c80a257f37be0ed7f61b0f4db39561172817f203 Mon Sep 17 00:00:00 2001
From: kshakir <kshakir@348d0f76-0448-11de-a6fe-93d51630548a>
Date: Thu, 8 Jul 2010 14:36:24 +0000
Subject: [PATCH] Updated for CentOS changes. See:
 http://iwww.broadinstitute.org/itsystems/wiki/Dotkit#Job_Specific_Wrapper_Script

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@3742 348d0f76-0448-11de-a6fe-93d51630548a
---
 perl/maf_annotation/annotate_single_maf.pl     | 3 ++-
 perl/maf_annotation/vcf_to_germline_maflite.pl | 2 +-
 2 files changed, 3 insertions(+), 2 deletions(-)

diff --git a/perl/maf_annotation/annotate_single_maf.pl b/perl/maf_annotation/annotate_single_maf.pl
index eaf29f406..e9364e3e3 100755
--- a/perl/maf_annotation/annotate_single_maf.pl
+++ b/perl/maf_annotation/annotate_single_maf.pl
@@ -1,4 +1,5 @@
-#!/util/bin/perl -w
+#!/usr/bin/env perl
+use warnings;
 use strict;
 
 if (scalar(@ARGV) != 1) {
diff --git a/perl/maf_annotation/vcf_to_germline_maflite.pl b/perl/maf_annotation/vcf_to_germline_maflite.pl
index fadd98753..ab8ea4f09 100755
--- a/perl/maf_annotation/vcf_to_germline_maflite.pl
+++ b/perl/maf_annotation/vcf_to_germline_maflite.pl
@@ -1,4 +1,4 @@
-#!/util/bin/perl
+#!/usr/bin/env perl
 $|++;
 use strict;