From c74bd871b186b017ac9e76e0e5b4fb3a20350886 Mon Sep 17 00:00:00 2001
From: ebanks <ebanks@348d0f76-0448-11de-a6fe-93d51630548a>
Date: Tue, 17 Mar 2009 14:08:54 +0000
Subject: [PATCH] added module for aligned reads

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@77 348d0f76-0448-11de-a6fe-93d51630548a
---
 .../java/src/org/broadinstitute/sting/gatk/GenomeAnalysisTK.java | 1 +
 1 file changed, 1 insertion(+)

diff --git a/playground/java/src/org/broadinstitute/sting/gatk/GenomeAnalysisTK.java b/playground/java/src/org/broadinstitute/sting/gatk/GenomeAnalysisTK.java
index 59dec1762..b08f633cb 100644
--- a/playground/java/src/org/broadinstitute/sting/gatk/GenomeAnalysisTK.java
+++ b/playground/java/src/org/broadinstitute/sting/gatk/GenomeAnalysisTK.java
@@ -39,6 +39,7 @@ public class GenomeAnalysisTK extends CommandLineProgram {
         addModule("CountReads", new CountReadsWalker());
         addModule("PrintReads", new PrintReadsWalker());
         addModule("Base_Quality_Histogram", new BaseQualityHistoWalker());
+        addModule("Aligned_Reads_Histogram", new AlignedReadsHistoWalker());
         addModule("AlleleFrequency", new AlleleFrequencyWalker());
         addModule("SingleSampleGenotyper", new SingleSampleGenotyper());
         addModule("Null", new NullWalker());