diff --git a/playground/java/src/org/broadinstitute/sting/gatk/GenomeAnalysisTK.java b/playground/java/src/org/broadinstitute/sting/gatk/GenomeAnalysisTK.java index 59dec1762..b08f633cb 100644 --- a/playground/java/src/org/broadinstitute/sting/gatk/GenomeAnalysisTK.java +++ b/playground/java/src/org/broadinstitute/sting/gatk/GenomeAnalysisTK.java @@ -39,6 +39,7 @@ public class GenomeAnalysisTK extends CommandLineProgram { addModule("CountReads", new CountReadsWalker()); addModule("PrintReads", new PrintReadsWalker()); addModule("Base_Quality_Histogram", new BaseQualityHistoWalker()); + addModule("Aligned_Reads_Histogram", new AlignedReadsHistoWalker()); addModule("AlleleFrequency", new AlleleFrequencyWalker()); addModule("SingleSampleGenotyper", new SingleSampleGenotyper()); addModule("Null", new NullWalker());