Updated preQC:

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- full 8.5x11
- concating multiple initiatives / bait_sets
- Using NA instead of python None when WR dates are unavailable
- In new aggregations where the sample may have per library metrics, only using the sample level metrics, i.e. library is null
Updated postQC:
- Renamed some variables to assist with traceback()
- Fixed crashes on batches with two alleles or two samples such as Seminara_MC_1_09222011 or Engle_MC_2_09222011
- Added dependency tracking to PostCallingQC.scala so that the R script does try to run before the evals are complete
Other minor cleanup.
Tried to use R 2.13 compactPDF but a few issues to work out with fingerprint boxplots in preQC and geom_text font size in postQC.

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Khalid Shakir 2011-09-28 20:23:30 -04:00

parent edf852d47d

commit c5f1a4325f

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