From c56c2641a8220b404f934abb806aaf84ca6b2572 Mon Sep 17 00:00:00 2001
From: ebanks <ebanks@348d0f76-0448-11de-a6fe-93d51630548a>
Date: Wed, 6 Oct 2010 12:54:38 +0000
Subject: [PATCH] /broad/1KG doesn't exist

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@4435 348d0f76-0448-11de-a6fe-93d51630548a
---
 packages/GATKResources.xml | 12 ++++++------
 1 file changed, 6 insertions(+), 6 deletions(-)

diff --git a/packages/GATKResources.xml b/packages/GATKResources.xml
index 551570a48..87e6e0e50 100755
--- a/packages/GATKResources.xml
+++ b/packages/GATKResources.xml
@@ -4,17 +4,17 @@
     <file name="/humgen/gsa-scr1/GATK_Data/dbsnp_129_b36.rod" />
     <file name="/humgen/gsa-scr1/GATK_Data/dbsnp_129_b37.rod" />
     <file name="/humgen/gsa-scr1/GATK_Data/dbsnp_130_b36.rod" />
-    <file name="/broad/1KG/reference/human_b36_both.fasta" />
-    <file name="/broad/1KG/reference/human_b36_both.dict" />
-    <file name="/broad/1KG/reference/human_b36_both.fasta.fai" />
+    <file name="/humgen/1kg/reference/human_b36_both.fasta" />
+    <file name="/humgen/1kg/reference/human_b36_both.dict" />
+    <file name="/humgen/1kg/reference/human_b36_both.fasta.fai" />
     <file name="/humgen/gsa-scr1/GATK_Data/dbsnp_129_hg18.rod" />
     <file name="/humgen/gsa-scr1/GATK_Data/dbsnp_130_hg18.rod" />
     <file name="/seq/references/Homo_sapiens_assembly18/v0/Homo_sapiens_assembly18.fasta" />
     <file name="/seq/references/Homo_sapiens_assembly18/v0/Homo_sapiens_assembly18.dict" />
     <file name="/seq/references/Homo_sapiens_assembly18/v0/Homo_sapiens_assembly18.fasta.fai" />
     <file name="/humgen/gsa-scr1/GATK_Data/dbsnp_130_b37.rod" />
-    <file name="/broad/1KG/reference/human_g1k_v37.fasta" />
-    <file name="/broad/1KG/reference/human_g1k_v37.dict" />
-    <file name="/broad/1KG/reference/human_g1k_v37.fasta.fai" />
+    <file name="/humgen/1kg/reference/human_g1k_v37.fasta" />
+    <file name="/humgen/1kg/reference/human_g1k_v37.dict" />
+    <file name="/humgen/1kg/reference/human_g1k_v37.fasta.fai" />
    </resources>
 </package>