From c52d2d5f799764b2b16c90cbee03ccd5e9ad9cb6 Mon Sep 17 00:00:00 2001
From: depristo <depristo@348d0f76-0448-11de-a6fe-93d51630548a>
Date: Sat, 22 Jan 2011 18:50:59 +0000
Subject: [PATCH] Bug fix for SimpleTimer that didn't always convert elapsed
 times from milliseconds to seconds

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@5055 348d0f76-0448-11de-a6fe-93d51630548a
---
 java/src/org/broadinstitute/sting/utils/SimpleTimer.java | 5 +----
 1 file changed, 1 insertion(+), 4 deletions(-)

diff --git a/java/src/org/broadinstitute/sting/utils/SimpleTimer.java b/java/src/org/broadinstitute/sting/utils/SimpleTimer.java
index a683eb140..2d45f04fa 100644
--- a/java/src/org/broadinstitute/sting/utils/SimpleTimer.java
+++ b/java/src/org/broadinstitute/sting/utils/SimpleTimer.java
@@ -46,10 +46,7 @@ public class SimpleTimer {
     }
 
     public double getElapsedTime() {
-        if ( running )
-            return (currentTime() - startTime) / 1000.0;
-        else
-            return elapsed;
+        return (running ? (currentTime() - startTime) : elapsed) / 1000.0;
     }