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Changing documentation (temporarily) to warn people that -U is not supported. 

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@4198 348d0f76-0448-11de-a6fe-93d51630548a
This commit is contained in:
ebanks 2010-09-03 03:18:07 +00:00
parent 8a7f5aba4b
commit c45ffcdaed
1 changed files with 1 additions and 1 deletions
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2
java/src/org/broadinstitute/sting/gatk/arguments/GATKArgumentCollection.java
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@ -162,7 +162,7 @@ public class GATKArgumentCollection {
public SAMFileReader.ValidationStringency strictnessLevel = SAMFileReader.ValidationStringency.SILENT;
@Element(required = false)
@Argument(fullName = "unsafe", shortName = "U", doc = "If set, enables unsafe operations, nothing will be checked at runtime.", required = false)
@Argument(fullName = "unsafe", shortName = "U", doc = "If set, enables unsafe operations: nothing will be checked at runtime. For expert users only who know what they are doing. We do not support usage of this argument.", required = false)
public ValidationExclusion.TYPE unsafe;
/** How many threads should be allocated to this analysis. */