quick fixes to the scala script

Browse Source

* Increase the memory limit for HTSLIB - Bam shuffling just eats up a ton of memory.
   * Concurrent HTSLIB processes need unique temp files the bam shuffling step was messing up with the temporary files and failing without returning zero. Fixed it by giving a unique name to each process.

...

This commit is contained in:

Mauricio Carneiro 2013-04-25 20:13:20 -04:00

parent 191e4ca251

commit c38b8065d8

Show all changes Ignore whitespace when comparing lines Ignore changes in amount of whitespace Ignore changes in whitespace at EOL

Show Stats Download Patch File Download Diff File Expand all files Collapse all files

Diff Content Not Available