Restore a jar packaging change that got clobbered.

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@1962 348d0f76-0448-11de-a6fe-93d51630548a
2009-11-03 00:15:45 +00:00 · 2009-11-03 00:15:45 +00:00 · c313abf0be
parent c63af32fc7
commit c313abf0be
1 changed files with 4 additions and 1 deletions
--- a/build.xml
+++ b/build.xml
@ -101,7 +101,10 @@
        </jar>

        <jar jarfile="${dist}/GenomeAnalysisTK.jar">
-            <fileset dir="build" includes="**/gatk/**/*.class"/>
+            <fileset dir="build">
+              <include name="**/gatk/**/*.class" />
+              <include name="**/alignment/**/*.class"/>
+            </fileset>
            <manifest>
                <attribute name="Main-Class" value="org.broadinstitute.sting.gatk.CommandLineGATK"/>
            </manifest>