From c2ae6765a38c2e12727efdef83863e970cc1bab8 Mon Sep 17 00:00:00 2001 From: depristo Date: Fri, 27 Mar 2009 22:48:51 +0000 Subject: [PATCH] Removed unnecessary dependence on playground code... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@217 348d0f76-0448-11de-a6fe-93d51630548a --- .../sting/gatk/iterators/MergingSamRecordIterator2.java | 4 +--- 1 file changed, 1 insertion(+), 3 deletions(-) diff --git a/java/src/org/broadinstitute/sting/gatk/iterators/MergingSamRecordIterator2.java b/java/src/org/broadinstitute/sting/gatk/iterators/MergingSamRecordIterator2.java index 038cfb5e2..db89da9e1 100644 --- a/java/src/org/broadinstitute/sting/gatk/iterators/MergingSamRecordIterator2.java +++ b/java/src/org/broadinstitute/sting/gatk/iterators/MergingSamRecordIterator2.java @@ -29,14 +29,12 @@ import net.sf.samtools.*; import java.util.*; import java.lang.reflect.Constructor; -import org.broadinstitute.sting.playground.gatk.iterators.SeekableSamIteration; - /** * Provides an iterator interface for merging multiple underlying iterators into a single * iterable stream. The underlying iterators/files must all have the same sort order unless * the requested output format is unsorted, in which case any combination is valid. */ -public class MergingSamRecordIterator2 implements Iterator, SeekableSamIteration { +public class MergingSamRecordIterator2 implements Iterator { protected PriorityQueue pq; protected final SamFileHeaderMerger samHeaderMerger; protected final SAMFileHeader.SortOrder sortOrder;