diff --git a/java/test/org/broadinstitute/sting/gatk/walkers/genotyper/UnifiedGenotyperIntegrationTest.java b/java/test/org/broadinstitute/sting/gatk/walkers/genotyper/UnifiedGenotyperIntegrationTest.java index f3b97f129..2abdee1ed 100755 --- a/java/test/org/broadinstitute/sting/gatk/walkers/genotyper/UnifiedGenotyperIntegrationTest.java +++ b/java/test/org/broadinstitute/sting/gatk/walkers/genotyper/UnifiedGenotyperIntegrationTest.java @@ -68,7 +68,7 @@ public class UnifiedGenotyperIntegrationTest extends WalkerTest { public void testMultiSamplePilot1Joint() { WalkerTest.WalkerTestSpec spec = new WalkerTest.WalkerTestSpec( "-T UnifiedGenotyper -R /broad/1KG/reference/human_b36_both.fasta -I /humgen/gsa-scr1/GATK_Data/Validation_Data/low_coverage_CEU.chr1.10k-11k.bam -varout %s -L 1:10,023,400-10,024,000 -bm empirical -gm JOINT_ESTIMATE -confidence 30", 1, - Arrays.asList("7e277cca463b88da7236b3f5775673ba")); + Arrays.asList("aa4a5c8ae775f8e3484d50424900370e")); executeTest("testMultiSamplePilot1 - Joint Estimate", spec); } @@ -76,7 +76,7 @@ public class UnifiedGenotyperIntegrationTest extends WalkerTest { public void testMultiSamplePilot2Joint() { WalkerTest.WalkerTestSpec spec = new WalkerTest.WalkerTestSpec( "-T UnifiedGenotyper -R /broad/1KG/reference/human_b36_both.fasta -I /humgen/gsa-scr1/GATK_Data/Validation_Data/pilot2_daughters.chr20.10k-11k.bam -varout %s -L 20:10,000,000-10,010,000 -bm empirical -gm JOINT_ESTIMATE -confidence 30", 1, - Arrays.asList("66e08dc365f76ae8ff1a69316f7f9be2")); + Arrays.asList("c262ec6b341c854a24d082cee2c8e318")); executeTest("testMultiSamplePilot2 - Joint Estimate", spec); } @@ -84,7 +84,7 @@ public class UnifiedGenotyperIntegrationTest extends WalkerTest { public void testSingleSamplePilot2Joint() { WalkerTest.WalkerTestSpec spec = new WalkerTest.WalkerTestSpec( "-T UnifiedGenotyper -R /broad/1KG/reference/human_b36_both.fasta -I /humgen/gsa-scr1/GATK_Data/Validation_Data/NA12878.1kg.p2.chr1_10mb_11_mb.SLX.bam -varout %s -L 1:10,067,000-10,083,000 -bm empirical -gm JOINT_ESTIMATE -confidence 30", 1, - Arrays.asList("fea53da1366fed6d7fed02eb11292666")); + Arrays.asList("368217e47a34bce2dac89a9786675104")); executeTest("testSingleSamplePilot2 - Joint Estimate", spec); }