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Modified UnitTests to respect reference padding

This commit is contained in:
Mark DePristo 2012-04-06 16:27:20 -04:00
parent 3e29841776
commit c22a66870c
1 changed files with 1 additions and 1 deletions
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public/java/test/org/broadinstitute/sting/utils/variantcontext/VariantContextUtilsUnitTest.java
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@ -604,7 +604,7 @@ public class VariantContextUtilsUnitTest extends BaseTest {
private RepeatDetectorTest(boolean isTrueRepeat, String ref, String refAlleleString, String ... altAlleleStrings) { private RepeatDetectorTest(boolean isTrueRepeat, String ref, String refAlleleString, String ... altAlleleStrings) {
super(RepeatDetectorTest.class); super(RepeatDetectorTest.class);
this.ref = ref; this.ref = "N" + ref; // add a dummy base for the event here
this.isTrueRepeat = isTrueRepeat; this.isTrueRepeat = isTrueRepeat;
List<Allele> alleles = new LinkedList<Allele>(); List<Allele> alleles = new LinkedList<Allele>();