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PEDReader should be in samples

This commit is contained in:
Mark DePristo 2011-09-30 14:22:19 -04:00
parent 56f10b40a8
commit c1cf6bc45a
2 changed files with 2 additions and 7 deletions
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4
public/java/src/org/broadinstitute/sting/utils/ped/PedReader.java → public/java/src/org/broadinstitute/sting/gatk/samples/PedReader.java
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@ -22,11 +22,9 @@
* OTHER DEALINGS IN THE SOFTWARE. * OTHER DEALINGS IN THE SOFTWARE.
*/ */
package org.broadinstitute.sting.utils.ped; package org.broadinstitute.sting.gatk.samples;
import org.apache.log4j.Logger; import org.apache.log4j.Logger;
import org.broadinstitute.sting.gatk.samples.Sample;
import org.broadinstitute.sting.gatk.samples.SampleDataSource;
import org.broadinstitute.sting.utils.MathUtils; import org.broadinstitute.sting.utils.MathUtils;
import org.broadinstitute.sting.utils.exceptions.ReviewedStingException; import org.broadinstitute.sting.utils.exceptions.ReviewedStingException;
import org.broadinstitute.sting.utils.exceptions.UserException; import org.broadinstitute.sting.utils.exceptions.UserException;

5
public/java/src/org/broadinstitute/sting/gatk/samples/Sample.java
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@ -6,10 +6,7 @@ import java.util.HashMap;
import java.util.Map; import java.util.Map;
/** /**
* Created by IntelliJ IDEA. *
* User: brett
* Date: Jul 26, 2010
* Time: 3:31:38 PM
*/ */
public class Sample implements java.io.Serializable { public class Sample implements java.io.Serializable {
final private String familyID, paternalID, maternalID; final private String familyID, paternalID, maternalID;