diff --git a/public/java/src/org/broadinstitute/sting/utils/exceptions/UserException.java b/public/java/src/org/broadinstitute/sting/utils/exceptions/UserException.java index fd0cf7869..a1ffaea4f 100755 --- a/public/java/src/org/broadinstitute/sting/utils/exceptions/UserException.java +++ b/public/java/src/org/broadinstitute/sting/utils/exceptions/UserException.java @@ -215,6 +215,12 @@ public class UserException extends ReviewedStingException { } } + public static class MalformedBCF2 extends UserException { + public MalformedBCF2( String message ) { + super(String.format("Malformed BCF2 file: %s", message)); + } + } + public static class MalformedVCFHeader extends UserException { public MalformedVCFHeader(String message) { super(String.format("The provided VCF file has a malformed header: %s", message));