diff --git a/R/DataProcessingReport/Tearsheet.R b/R/DataProcessingReport/Tearsheet.R index e016adb96..6104b6419 100644 --- a/R/DataProcessingReport/Tearsheet.R +++ b/R/DataProcessingReport/Tearsheet.R @@ -34,9 +34,9 @@ for(squid in squids){ } gsa.read.gatkreport(paste(cmdargs$evalroot, ".eval", sep=""))->FCeval -gsa.read.gatkreport(paste(cmdargs$evalroot, "extraFC.eval", sep=""))->FCeval -gsa.read.gatkreport(paste(cmdargs$evalroot, "extraFI.eval", sep=""))->FIeval -gsa.read.gatkreport(paste(cmdargs$evalroot, "extraSA.eval", sep=""))->SAeval +gsa.read.gatkreport(paste(cmdargs$evalroot, ".extraFC.eval", sep=""))->FCeval +gsa.read.gatkreport(paste(cmdargs$evalroot, ".extraFI.eval", sep=""))->FIeval +gsa.read.gatkreport(paste(cmdargs$evalroot, ".extraSA.eval", sep=""))->SAeval tearsheet<-function(){