useful convenience function to get a genotype associated with a particular sample
git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@2510 348d0f76-0448-11de-a6fe-93d51630548a
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@ -417,6 +417,16 @@ public class VCFRecord implements Variation, VariantBackedByGenotype {
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return names;
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}
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public VCFGenotypeRecord getGenotype(final String sampleName) {
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for ( VCFGenotypeRecord rec : getVCFGenotypeRecords() ) {
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if ( rec.getSampleName().equals(sampleName) ) {
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return rec;
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}
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}
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return null;
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}
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public String getGenotypeFormatString() {
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return mGenotypeFormatString;
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}// the formatting string for our genotype records
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