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2009_02 release is no longer with us. Update the bam list. 

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@1406 348d0f76-0448-11de-a6fe-93d51630548a
This commit is contained in:
hanna 2009-08-11 12:49:23 +00:00
parent 1851613de4
commit bb1d31914c
1 changed files with 3 additions and 3 deletions
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6
testdata/ValidatingPileupTargets.list vendored
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@ -2,13 +2,13 @@
/humgen/gsa-scr1/GATK_Data/Validation_Data/MV1994.bam /humgen/gsa-scr1/GATK_Data/Validation_Data/Escherichia_coli_K12_MG1655.fasta *
# daughter chrom 6 deep coverage first 10 MB
/broad/1KG/DCC/data/NA12878/alignment/NA12878.chrom6.SRP000032.2009_02.bam /broad/1KG/reference/human_b36_both.fasta 6:1-10,000,00
/broad/1KG/DCC/data/NA12878/alignment/NA12878.chrom6.SLX.SRP000032.2009_06.bam /broad/1KG/reference/human_b36_both.fasta 6:1-10,000,00
# daughter chrom 1 deep coverage
/broad/1KG/DCC/data/NA12878/alignment/NA12878.chrom1.SRP000032.2009_02.bam /broad/1KG/reference/human_b36_both.fasta *
/broad/1KG/DCC/data/NA12878/alignment/NA12878.chrom1.SLX.SRP000032.2009_06.bam /broad/1KG/reference/human_b36_both.fasta *
# mother of trio individual low coverage
/broad/1KG/DCC/data/NA12892/alignment/NA12892.SRP000031.2009_02.bam /broad/1KG/reference/human_b36_both.fasta *
/broad/1KG/DCC/data/NA12892/alignment/NA12892.SLX.SRP000031.2009_06.bam /broad/1KG/reference/human_b36_both.fasta *
# Pilot 3
/broad/1KG/pilot3/sams/NA12892.bam /seq/references/Homo_sapiens_assembly18/v0/Homo_sapiens_assembly18.fasta *