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Fix docs

This commit is contained in:
Eric Banks 2012-06-06 22:45:38 -04:00
parent b093ba9dcc
commit bad50a1b05
1 changed files with 1 additions and 1 deletions
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public/java/src/org/broadinstitute/sting/gatk/walkers/indels/IndelRealigner.java
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@ -103,7 +103,7 @@ import java.util.*;
* -T IndelRealigner \ * -T IndelRealigner \
* -targetIntervals intervalListFromRTC.intervals \ * -targetIntervals intervalListFromRTC.intervals \
* -o realignedBam.bam \ * -o realignedBam.bam \
* [--known /path/to/indels.vcf] \ * [-known /path/to/indels.vcf] \
* [-compress 0] (this argument recommended to speed up the process *if* this is only a temporary file; otherwise, use the default value) * [-compress 0] (this argument recommended to speed up the process *if* this is only a temporary file; otherwise, use the default value)
* </pre> * </pre>
* *