diff --git a/public/java/src/org/broadinstitute/sting/gatk/walkers/diagnostics/ReadGroupProperties.java b/public/java/src/org/broadinstitute/sting/gatk/walkers/diagnostics/ReadGroupProperties.java
index c192d04e7..2eb3b5e85 100644
--- a/public/java/src/org/broadinstitute/sting/gatk/walkers/diagnostics/ReadGroupProperties.java
+++ b/public/java/src/org/broadinstitute/sting/gatk/walkers/diagnostics/ReadGroupProperties.java
@@ -36,13 +36,14 @@ import org.broadinstitute.sting.utils.Median;
import org.broadinstitute.sting.utils.sam.GATKSAMRecord;
import java.io.PrintStream;
+import java.text.DateFormat;
import java.util.HashMap;
import java.util.Map;
/**
- * Emits a GATKReport containing read group, sample, library, platform, center, paired end status,
- * simple read type name (e.g. 2x76) median insert size and median read length for each read group
- * in every provided BAM file
+ * Emits a GATKReport containing read group, sample, library, platform, center, sequencing data,
+ * paired end status, simple read type name (e.g. 2x76) median insert size and median read length
+ * for each read group in every provided BAM file
*
* Note that this walker stops when all read groups have been observed at least a few thousand times so that
* the median statistics are well determined. It is safe to run it WG and it'll finish in an appropriate
@@ -61,23 +62,23 @@ import java.util.Map;
*
*
* ##:GATKReport.v0.2 ReadGroupProperties : Table of read group properties
- * readgroup sample library platform center has.any.reads is.paired.end n.reads.analyzed simple.read.type median.read.length median.insert.size
- * 20FUK.1 NA12878 Solexa-18483 illumina BI true true 10100 2x101 101 387
- * 20FUK.2 NA12878 Solexa-18484 illumina BI true true 10115 2x101 101 415
- * 20FUK.3 NA12878 Solexa-18483 illumina BI true true 10090 2x101 101 388
- * 20FUK.4 NA12878 Solexa-18484 illumina BI true true 10081 2x101 101 415
- * 20FUK.5 NA12878 Solexa-18483 illumina BI true true 10078 2x101 101 387
- * 20FUK.6 NA12878 Solexa-18484 illumina BI true true 10072 2x101 101 415
- * 20FUK.7 NA12878 Solexa-18483 illumina BI true true 10086 2x101 101 388
- * 20FUK.8 NA12878 Solexa-18484 illumina BI true true 10097 2x101 101 415
- * 20GAV.1 NA12878 Solexa-18483 illumina BI true true 10135 2x101 101 388
- * 20GAV.2 NA12878 Solexa-18484 illumina BI true true 10172 2x101 101 415
- * 20GAV.3 NA12878 Solexa-18483 illumina BI true true 10141 2x101 101 388
- * 20GAV.4 NA12878 Solexa-18484 illumina BI true true 10251 2x101 101 416
- * 20GAV.5 NA12878 Solexa-18483 illumina BI true true 10145 2x101 101 388
- * 20GAV.6 NA12878 Solexa-18484 illumina BI true true 10184 2x101 101 415
- * 20GAV.7 NA12878 Solexa-18483 illumina BI true true 10174 2x101 101 387
- * 20GAV.8 NA12878 Solexa-18484 illumina BI true true 10141 2x101 101 414
+ * readgroup sample library platform center date has.any.reads is.paired.end n.reads.analyzed simple.read.type median.read.length median.insert.size
+ * 20FUK.1 NA12878 Solexa-18483 illumina BI 2/2/10 true true 498 2x101 101 386
+ * 20FUK.2 NA12878 Solexa-18484 illumina BI 2/2/10 true true 476 2x101 101 417
+ * 20FUK.3 NA12878 Solexa-18483 illumina BI 2/2/10 true true 407 2x101 101 387
+ * 20FUK.4 NA12878 Solexa-18484 illumina BI 2/2/10 true true 389 2x101 101 415
+ * 20FUK.5 NA12878 Solexa-18483 illumina BI 2/2/10 true true 433 2x101 101 386
+ * 20FUK.6 NA12878 Solexa-18484 illumina BI 2/2/10 true true 480 2x101 101 418
+ * 20FUK.7 NA12878 Solexa-18483 illumina BI 2/2/10 true true 450 2x101 101 386
+ * 20FUK.8 NA12878 Solexa-18484 illumina BI 2/2/10 true true 438 2x101 101 418
+ * 20GAV.1 NA12878 Solexa-18483 illumina BI 1/26/10 true true 490 2x101 101 391
+ * 20GAV.2 NA12878 Solexa-18484 illumina BI 1/26/10 true true 485 2x101 101 417
+ * 20GAV.3 NA12878 Solexa-18483 illumina BI 1/26/10 true true 460 2x101 101 392
+ * 20GAV.4 NA12878 Solexa-18484 illumina BI 1/26/10 true true 434 2x101 101 415
+ * 20GAV.5 NA12878 Solexa-18483 illumina BI 1/26/10 true true 479 2x101 101 389
+ * 20GAV.6 NA12878 Solexa-18484 illumina BI 1/26/10 true true 461 2x101 101 416
+ * 20GAV.7 NA12878 Solexa-18483 illumina BI 1/26/10 true true 509 2x101 101 386
+ * 20GAV.8 NA12878 Solexa-18484 illumina BI 1/26/10 true true 476 2x101 101 410 101 414
*
*
*
@@ -172,6 +173,7 @@ public class ReadGroupProperties extends ReadWalker {
final GATKReport report = new GATKReport();
report.addTable(TABLE_NAME, "Table of read group properties");
GATKReportTable table = report.getTable(TABLE_NAME);
+ DateFormat dateFormatter = DateFormat.getDateInstance(DateFormat.SHORT);
table.addPrimaryKey("readgroup");
//* Emits a GATKReport containing read group, sample, library, platform, center, median insert size and
@@ -180,6 +182,7 @@ public class ReadGroupProperties extends ReadWalker {
table.addColumn("library", "NA");
table.addColumn("platform", "NA");
table.addColumn("center", "NA");
+ table.addColumn("date", "NA");
table.addColumn("has.any.reads", "false");
table.addColumn("is.paired.end", "false");
table.addColumn("n.reads.analyzed", "NA");
@@ -200,6 +203,7 @@ public class ReadGroupProperties extends ReadWalker {
table.set(rgID, "library", rg.getLibrary());
table.set(rgID, "platform", rg.getPlatform());
table.set(rgID, "center", rg.getSequencingCenter());
+ table.set(rgID, "date", dateFormatter.format(rg.getRunDate()));
table.set(rgID, "has.any.reads", hasAnyReads);
table.set(rgID, "is.paired.end", isPaired);
table.set(rgID, "n.reads.analyzed", info.nReadsSeen);