diff --git a/protected/java/test/org/broadinstitute/sting/gatk/walkers/bqsr/BQSRIntegrationTest.java b/protected/java/test/org/broadinstitute/sting/gatk/walkers/bqsr/BQSRIntegrationTest.java index b0e9ef4fe..c171c6973 100644 --- a/protected/java/test/org/broadinstitute/sting/gatk/walkers/bqsr/BQSRIntegrationTest.java +++ b/protected/java/test/org/broadinstitute/sting/gatk/walkers/bqsr/BQSRIntegrationTest.java @@ -137,7 +137,7 @@ public class BQSRIntegrationTest extends WalkerTest { "-T PrintReads" + " -R " + hg18Reference + " -I " + privateTestDir + "HiSeq.1mb.1RG.bam" + - " -BQSR " + privateTestDir + "HiSeq.1mb.1RG.table" + + " -BQSR " + privateTestDir + "HiSeq.20mb.1RG.table" + params.args + " -o %s", Arrays.asList(params.md5));