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Oops. I gave this method the wrong name first time around. 

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@283 348d0f76-0448-11de-a6fe-93d51630548a
This commit is contained in:
kiran 2009-04-03 15:46:26 +00:00
parent 9bbce32064
commit b854c24575
1 changed files with 1 additions and 1 deletions
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2
java/src/org/broadinstitute/sting/utils/QualityUtils.java
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@ -11,7 +11,7 @@ public class QualityUtils {
return (byte) Math.round(-10.0*Math.log10(1.0 - prob + 0.0001)); return (byte) Math.round(-10.0*Math.log10(1.0 - prob + 0.0001));
} }
static public byte qualAndProbToCompressedQuality(int baseIndex, double prob) { static public byte baseAndProbToCompressedQuality(int baseIndex, double prob) {
byte compressedQual = (byte) baseIndex; byte compressedQual = (byte) baseIndex;
byte cprob = (byte) (100.0*prob); byte cprob = (byte) (100.0*prob);
byte qualmask = (byte) 252; byte qualmask = (byte) 252;