From b7097a8db9e892638d28e1036dda652dc121da10 Mon Sep 17 00:00:00 2001
From: hanna <hanna@348d0f76-0448-11de-a6fe-93d51630548a>
Date: Fri, 13 Nov 2009 22:29:29 +0000
Subject: [PATCH] Build aligner as separate jar file.

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@2044 348d0f76-0448-11de-a6fe-93d51630548a
---
 build.xml | 4 ++++
 1 file changed, 4 insertions(+)

diff --git a/build.xml b/build.xml
index c65c12d93..ef2121a3f 100644
--- a/build.xml
+++ b/build.xml
@@ -110,6 +110,10 @@
             </manifest>
         </jar>
 
+	<jar jarfile="${dist}/Aligner.jar">
+	  <fileset dir="build" includes="**/alignment/**/*.class" />
+	</jar>
+
         <jar jarfile="${dist}/FourBaseRecaller.jar" whenmanifestonly="skip">
           <fileset dir="build">
             <include name="**/secondarybase/**/*.class" />