From b6339967f89dd20fee5f5a04fb9e53e079162c73 Mon Sep 17 00:00:00 2001
From: kiran <kiran@348d0f76-0448-11de-a6fe-93d51630548a>
Date: Mon, 7 Mar 2011 23:07:01 +0000
Subject: [PATCH] Updated GenomicAnnotator integration tests to include the
 -NO_HEADER argument so that they  tests op yelling about trtrivial
 differences

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@5398 348d0f76-0448-11de-a6fe-93d51630548a
---
 .../genomicannotator/GenomicAnnotatorIntegrationTest.java     | 4 +++-
 1 file changed, 3 insertions(+), 1 deletion(-)

diff --git a/java/test/org/broadinstitute/sting/gatk/walkers/annotator/genomicannotator/GenomicAnnotatorIntegrationTest.java b/java/test/org/broadinstitute/sting/gatk/walkers/annotator/genomicannotator/GenomicAnnotatorIntegrationTest.java
index 594694c46..b924f3ec5 100755
--- a/java/test/org/broadinstitute/sting/gatk/walkers/annotator/genomicannotator/GenomicAnnotatorIntegrationTest.java
+++ b/java/test/org/broadinstitute/sting/gatk/walkers/annotator/genomicannotator/GenomicAnnotatorIntegrationTest.java
@@ -54,10 +54,11 @@ public class GenomicAnnotatorIntegrationTest extends WalkerTest {
                         "-L 22:10000000-20000000",
                         "-B:refseq,AnnotatorInputTable " + b37Refseq,
                         "-B:variant,VCF " + testFileWithIndels,
+                        "-NO_HEADER",
                         "-o %s"
                 ),
                 1,
-                Arrays.asList("1f8189433e87cc0b986cddb6a9a74585")
+                Arrays.asList("cdf1037b5d17635398268f473160730c")
         );
         executeTest("testGenomicAnnotatorOnIndels", testOnIndels);
     }
@@ -71,6 +72,7 @@ public class GenomicAnnotatorIntegrationTest extends WalkerTest {
                         "-L 22:10000000-20000000",
                         "-B:refseq,AnnotatorInputTable " + b37Refseq,
                         "-B:variant,VCF " + testFileWithSNPsAndIndels,
+                        "-NO_HEADER",
                         "-o %s"
                 ),
                 1,