diff --git a/settings/helpTemplates/common.html b/settings/helpTemplates/common.html
index 677fdf861..f4fb74af1 100644
--- a/settings/helpTemplates/common.html
+++ b/settings/helpTemplates/common.html
@@ -58,7 +58,7 @@
         <div class="navbar navbar-fixed-top">
             <div class="navbar-inner">
                 <div class="container-fluid">
-                    <a class="brand" href="index.html">GATK | Technical Documentation</a>
+                    <a class="brand" href="index.html">GATK | Tool Documentation</a>
                 </div>
             </div>
         </div>
@@ -82,7 +82,7 @@
         <hr>
         <p class="see-also">See also 
         	<a href="${guideIndex}">Guide Index</a> | 
-        	<a href="index.html">Technical Documentation Index</a> | 
+        	<a href="index.html">Tool Documentation Index</a> | 
         	<a href="${forum}">Support Forum</a>
         </p>
 
diff --git a/settings/helpTemplates/generic.index.template.html b/settings/helpTemplates/generic.index.template.html
index b3e3d0212..a5650d55e 100644
--- a/settings/helpTemplates/generic.index.template.html
+++ b/settings/helpTemplates/generic.index.template.html
@@ -53,8 +53,8 @@
     </div>
 </#macro>
 
-<@makeHeader title="Technical Documentation Index" isIndex=true />
-<h1>Technical Documentation Index
+<@makeHeader title="GATK | Tool Documentation Index" isIndex=true />
+<h1>Tool Documentation Index
     <small>${version}</small>
 </h1>
 <div class="accordion" id="index">
diff --git a/settings/helpTemplates/generic.template.html b/settings/helpTemplates/generic.template.html
index b78bba48c..eea741669 100644
--- a/settings/helpTemplates/generic.template.html
+++ b/settings/helpTemplates/generic.template.html
@@ -88,7 +88,7 @@
 </#macro>
 
 <?php $group = '${group}'; ?>
-<@makeHeader title="${name} documentation" isIndex=false />
+<@makeHeader title="GATK | ${name} documentation" isIndex=false />
 <section class="span4">
     <aside class="well">
         <h2>Categories</h2>