From b2b8a4f19f51310f198a740595ac8cfcd397b401 Mon Sep 17 00:00:00 2001 From: kshakir Date: Fri, 18 Mar 2011 19:40:31 +0000 Subject: [PATCH] Re-un-final'ed BAQ.MAG as it was pre r5469. git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@5472 348d0f76-0448-11de-a6fe-93d51630548a --- java/src/org/broadinstitute/sting/utils/baq/BAQ.java | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/java/src/org/broadinstitute/sting/utils/baq/BAQ.java b/java/src/org/broadinstitute/sting/utils/baq/BAQ.java index 993df55f6..7935b2b35 100644 --- a/java/src/org/broadinstitute/sting/utils/baq/BAQ.java +++ b/java/src/org/broadinstitute/sting/utils/baq/BAQ.java @@ -39,7 +39,7 @@ import org.broadinstitute.sting.utils.sam.ReadUtils; */ public class BAQ { private final static boolean DEBUG = false; - public final static int MAG = 1; // todo -- remove me for performance testing only + public static int MAG = 1; // todo -- remove me for performance testing only public enum CalculationMode { OFF, // don't apply a BAQ at all, the default