From b0560f9440054ebe893e0a7209756f085f399f16 Mon Sep 17 00:00:00 2001 From: Mark DePristo Date: Tue, 17 Jan 2012 15:56:49 -0500 Subject: [PATCH] Rev. tribble to fix BED codec bug in tribble 51 --- .../{tribble-51.jar => tribble-53.jar} | Bin 304586 -> 304182 bytes .../{tribble-51.xml => tribble-53.xml} | 2 +- 2 files changed, 1 insertion(+), 1 deletion(-) rename settings/repository/org.broad/{tribble-51.jar => tribble-53.jar} (92%) rename settings/repository/org.broad/{tribble-51.xml => tribble-53.xml} (51%) diff --git a/settings/repository/org.broad/tribble-51.jar b/settings/repository/org.broad/tribble-53.jar similarity index 92% rename from settings/repository/org.broad/tribble-51.jar rename to settings/repository/org.broad/tribble-53.jar index 04121804f22936341a786a08d97a58fc4293f595..02865df435a3e43dffaad91132c34afaec455d81 100644 GIT binary patch delta 8387 zcmahu30xIb_vg-BnD-t7JRd5X2#C0_sGykQ2Bs~pm}#OSxPYcCZvS)c%tNsMGW_n$d1t@po_p?@;p8dTp%X6u zjJ_&&0N4QR`AKX2Td6jDblM~z7b4~3k60CHMkGt5pH%~yO(nn>&TmV^aG!pP1YXh> zG6}@lyGfR+iF%NUDe(Wp#LR6_ZZbD*_@D`lYkb2b<%HcdF{2{ZsR3vqE%t?RuXa!Y zI;i6M2sOlL*Cs|3%;UaQJ)*mtG6l^o;Al(L#2k;Cpfw<2sB=XaEV_}gCfU!(Np?sV zCnpaxffHR{Fs)AO@uVh6Uq19HmoxVCO|p@unxeBWRMhn4tlGFfupO%wd7afrBR!+J z{XF=>N8kq^8&fg{uuqJ)GRE6aLjatCCQxl84oZ-outu%G=>j>LOHXnJ=*Fr+f$np5 zNPw9Rh=W-Uh=ETpH~1_d@KB;q0so^`-tSmJ=CuuOyH z4rl-?Y_QS>tBCbE`n}o#MNmx88V%MGdYv5%SWlP@cIah53H=tNsFaW!>9&dVZ`NQ7 zp|=ud8;NeWK^Z;EiTu0<6&h4(u%l|~W78E!A9M$uKr6-%kIyjrZA`9ue@Hyz$n=6y zGqhQwfbqHcgY!pE&mWkVHzPNnf!eC|qlWW|p%3kZR2`C_6Wx+^coC-Q&=%V1&;z>a z@Dl9OVK+=;z+!aR16d4w@~4j;JBfidX8O~!X5>!SVI*V;)`tZ-HF#Nvy|7P%{W`n? z2Mku+62+3B3gw$I03BY1gE|}nj|Q*l@H)Jq!(n*S2p!hE&0Fv`daJ_`7^lNKa8!qP z33`ui@52W=9E0OJoPZB?7zNpa<*SX1{euIdbT|p8bf|{YIz`FyV0F6L{#*l&#$k2oKpxq#_Sl@{Nl>1it$bGVS{!9U#Uyx+gfW8+4aaxMU<% z6)~zSbCc0c&;sx6(Agw3+5uXk*+ewg7S*O8a~DX5H0X(cz2RYa1RjSzFbw)a7W9K$ z7zp_=1m?g{SOQPLb1(wdB4s0nzYM7rkPSOv9A?au@G?wV|*8 zG`I#c;CGk}w_pxaU@p^PA#;J7MZqE&fg+5{5{zLQ&cKGMHFT&aLOU>84?-`54kD(v zq@Kj>`4GBkM@6KTbxZhRQ53X)DJ~C&haetN1PAN z^b`z0$QS3i4`-W!<_BTCk|0nI({6)HgU8q%Xr{qn#%@6i4IUq=!4Q56LJ`#)Q9-Q1 z4bU0|Vbq6Wh|CphBiF(Wz=I&>{smhhr)?$+uT7R=kZB2b#3wDc!tR$`EhWvAQM{8z z-r=||nDn#@>+0xAO4L1cm-%Yu%hvxzi5WSCb{6utH)f9M<=^~?1gBqesNI?H8Zh==pp&&z`fnV)$$Oux_`mmuCrjlj@pSjaFdyPekx2e z&hHM&@VQ^|T`6g1nvW^yOvkD|-O7^xyRhg~SdwOt5tQokKTEZ~KS!lhf|SB}<>Sm0 zcn0H0<&xp{jf2Fr(0fe}9`99|xknT_@2kQmH1unLK-$)m({A_l2cXeT9@y=k38|Vq z<1zmLBD3Es{uqEee}GM}Ni4+38SgSy<_1>z77nz@4r17fuXO^9^pf@xF{@;(*=>AT z_HiI#MDKx0jN$y;Zd~4Pmn`4!Z`)V`5yw}VeaP-J-b7F5X_%`(Ht_Eiy)Y-BD^^|Mk1lwW`ctuGwXm zlU@=dYV6FnPAf=JDY!k)?2GQ)ogo`PPktgh??XyFkF;kd(Q_j&0rcD@p){ z8%Lsu9?!x>;4&6yT+{;HB@T#&k#KPB52_n{tqjr%@XXmg%qpRvOnmO?-6Rf33ugEEdC7iHK3y zH9RNMMzOuN)lfu@NwHwxutuV6pc0I{ZDEZVv`w2G3`jf*_Kgq_m-r6Y4}xPSXejO{0>`qb(O*F`_y#BREmp!Gaijf& zC)jm)hR2zf5Ko-~+QgnC0XGCet#MN*C>1QXsES6{N-^St|9x`|nuI zZXos#tf7BGIQ%7kAInCBIgWwGcLJ9OhRJUp758-|buhc|&t;vNzj!#8wT}te2o4OWwo^VR#4jU%9h)pj zY|Uk^7rexJxn<;#|5?Ne-sxlzBH#^(9S zEjxYzJJgu=yNFuPx=K{`diIx%P@a)n*-?K9MeSxOff5?_2J0Cmp{<{@3qBHh<_e2* z$qM;)Kuz^*Jo#vJGI#sbf3h&ozkg=S{UquS`)fkmS_i z`RZ_aaCkx%s}K6iu#H-)I?Y6wwnZIlCda4c>KW6~7c10?SmF}{K2$%KO5#tdr%huw z&#HNv#Ett@{l%Q)@Nd+!PKitSQ+1kVd-(Ez1`?MM%y*b`{4G;KndhZTuYUC_RxKJ`sS^-6(|B{ScL(>~x$kN2OQytuXLu(Wy&s?9JtWX} zCT}Z&(KC69ircaxaUX7VQ_(0&&0BY}che4qqAn#CWJK+D-YLjrSW^Fb0gGuvVg zpTj3g%yKXA+Z>)NFBcm>z zY0xX6_o^%`A8Vw~2r&wBo#Ju6y-v_Hq0xJ&&tBN(~vVc zA)_x-8mhIQuj({rfM?phtFqAHHqI9$nD!{ouN9!ZvSrc{_lm}nAl<$v1Q1gD!wEm8 zuUK!SCpTPI?kn7d=rw66Dnu_N_*S; zT<_l$4e>6?9;?kbH7rzYT5Q?aw-_~by;`fuCjPUSx0L3$JddP`uSC)k-dZBE zmLTE_iHI=X`8r7KT4KfEb)uACC)Nlf=lei$%x$Gh9XIYs@6m`E$do@3}Ti!_NyYm!XT zStqlJU0%`=A_a6XNk65qP!YJ?TKalDa~=0FPo6OOsf8BfmRnZlEJsz-b4?QV0Kqa= zCkZ>`NfWzf0lHPzgK5Hlg_Rr5>xbsv#72`wk9t;WCe{k+BD)iIwR2HODlJ}tN*|e8 zhu$NNIm8!U`gNion^#MBiPV)CTq=i;u0)c19g$+h3dG8cDM&r@!G3&cqS3aV7jH|} zcyVQ=wUBu&vx_I;s~3&>$#r-$X^j^(%a|@FC=HHUMFw9YQd^OI1Ou>dm8ELv?8CqQ z8j1BA2Yt)(UX_KO*N8t|7MjGX=V2CBcp49SS@2m|c5wMv_+vJ}V3VoNj8lvX(cO32`BE?$xt80FA-*SX&gE ztOe^(wR5c!E;gcRDKz5KRt1?TK%;v-p}Z}o&^zmR(!Es=e~GY(5|NIRP=-lFw5Tz- zQxqFKN~*o+o3v*H?i?EC%buybvatU_QXu)8N!Ca2{<`i}JTYkCN2A)Svhe1+Cad#9 zB~cWtw<7Xp*1<3K*#T(O_c-#DrMeoYnX$nNF57@!#$7N;JvQ)&dy^^sl(6BlsTNzk z0((f{!aY)oTyE)W*n6+NUX9-tXwZjc?^Rjo`=zNWrvy(E+9NAVP)qY4OsrE?8c`VCs5f(2R57%?#bh1d>$cIRGf2eqGRM%*1WO2~H z2)tKi;j5j9tGx)@VtI0VBTm2faKg3{dmmN92VYI{*yVe$UDv`N)!e0`u%zq##LCV8Vp z`{%h!&g-qSZk8PjK%=!+DLyL;HGG|?CRF^2)YI(YKD|-6!af`M+2anx?4^`j9 z`(yv^f$)?i=q!!IdWu(`s4HAljnnM3&05+1+fe)PGu}AhH%GC*ry3wOdKvZ-!+RGj zhP3Uxf%wf!b8JW2>;Jw-Yc2EoDMGLM{T|vb3VPy}s+IeY7`Ab4PPc}PKJAM|>*h8L zC@p?z$@*#8xQl4i&!c^f?nwoRiDlL_+-0coiBO9c6^^CkT$z;}myxElh!xJ~@%W4^ zw+_iJ<%qr5(!}m<&2`~dYVG4ue?^Mj*d5WR-da!uJ{) z^;7lZHpHJI=T!SD`?n;ykYxEyueW0SW@}E=1*_xRb1^7|H~HIg$M)$`RE`ePpnt7+ zugbzQQ>2@j>{I~O!=hyp?PwiZif>>(1_AyX4SClj delta 8941 zcmaJm2Ur!?(sOnXx3Ls2f`CX7D@{Z(ia{l6o)H9$F$SXoBK8WFSOH^+ih?e35DO@z zsIf$%*Yb=SV~G{>VvKoFAuloJkI__gPmCuBpGIMB}w}YG3o$V1OIo3OCiMsmY{XJ(@bs{3W=_;UppRLLi|^2;_Zzsd;JuJAUzV}y5&@SX{_Tc926;FLQ# z(feH5E)(qL_dT3ruMs{l!agI^)Qo&NN3x`#hNu@VtVXe1)^`*QP`9!eZ`bkJnPakZ zk|s>e&J`>l;u19rhDH*yU)}X;YjsFzjOshA^@|6fw*uWDo?o6*zy=2u=nAn4^n(Ni z4#8msj=(_zBvgTa!gvBMGjlStCJ``>&Y3nRH#_C1wP}@zxd^IxT?Sxa7}?P;kp77U?RH`L%r3EYWZGbeY#)N#R@Ke!(MR^V&6p}y!s2NDPbs`W{M z>UU+~tRY|WQZtf$g(76k400>Cjy$HD?j4sD(cYNxG^XMBeh3x}k1L*^VCFp@y z3*G^I!3cg3hmfMtK~H!dpSX;8E<>F^BCrRicLy1-!9XDdXTn2an`U)WSgh2l}Ic0q_qg-=UWS?YG#AofDGbNh9|db612#Y= zRKj?ug3*{Fj4Tvwyo{E`f(zPq9)=)fKt=c9{7_u}RaB}ocqsnH zCtx+gF!B^y8{suV9z#1Lq`hi{;q)>1;Z%Q|@*>Ut3r24*^!n>Cg8LrXqr_h10Z=ap z-HQ`iz-U`o*d$n}t~x<~kJ6Y)OVrQ>d4|fp!Vf_k0%?OzgLj10d;l!v9B>tY5@A&k z*Z}@v5eL9+m^QxwTq5=^k;%Iar(5N1;SXeQ96bW<(yZ~F-H}l65Xcf+!d)E&=x0o^20S^a5yluHn|m7*&eO%E0U7m4 z?ouO+Me$hGG*@AU@vKGn%J1{5P+xQM`>0l^JyCcR@RZ~vT7XErM&VO;bxlS;w~oUi zJY8e_%$^Ykp`&^$V-N{bBQslx{22&VI_cFf;7oJ{!3wp#v1848q)r#k3!d!9E2c?)#mZ zzTAI1MWFJ`--!{;1DZoq(ZRfy>_neVLyx$_W|)r5E~sJ&CLj;!U|5A|7>fbj9+p5Z z@|tkjg&625U`CaP!YssE^l&#c;HFs6{pjOi80AKoO-w|47^bF<_D-LJ>rwQ#AC5O1 zJJ1U?;yPKv4?wsT12OXNJ8@B%tyL_GVc2ZN+gb}OG+Twd}@oZoGx782HPeKn$2b^+~XwI=SAW9>3+MJ`D3v%j;*e z+7WVd`((}MH*+*oU#cG?T1s{Ax7~z+KYaVKFtBF#FZay4rCkK(>ZAFRJ74Dv^$CrP zMC&41LWb-~ z2g67|iK57CcK>_g$2zVe!L~WW$ytJj#Bv2zz)A&EE>XdZO=Mdi$^mjGC{)wV1{;j9 znm`YAZ5!O*5#%iscB~49S+QD~?ak_jNG&YQ@}VO!Emq#f?K8CdF*aBRMAGnd0;7tO+kF~ye|Z^QC0(vx3 z>PkdKLYFyyek`F#YQ;vTOQQ1GCZtOnyac^Vt`r_1pe{vHyk=DHCTX82m8`>dUB&F} z(yyBS!}m)&H8RslDMa%}#Cgf2>Gs@JX_6?7oHdNqU6%|kop!0ur2)~Oox)`1BbkNV zkUFyqUrGKfuLLXQq?3}_HtEMSKLXJ$fu%6UV^*tMWJ6rW`iNcfz^F?ClsiMwtFpjQp*J zJkecV6C&KV^yrr*tFVvdqbD0&Df_eIFUlTlcNz7zZ5b}F*BH8G$mcaD&Wp=28libF z@ilr;Q>Wz!YSq+^o=nr9jpaaXGxk(bbJI@4c4-P7WRUT57Ym$8y9-C9&7{2ruyH2s zB!G)EsmK`SGKKWdW$OX{rEj&!&R~5I09BUOtCT z6f?iufy_5(wwU?!4Vo!{$hma90Ltdlu>v6TXpR78&%?0cvG~nAIz#~7=hFcKcym4- zDS-dX*SV4w&{xDv)dHF(fQAJ$!SRuc4OmED6~Wf{-HN@xkoF741^N`bM-?o>R+kU{ zN^SpD7bIn~6N{*?`g5U0y_IEPH)c^qu)H_7DC!)3MdYKCogVMi1@8D=W)Tf%MT@9a zkZwLVsFxl`t z+EPkfp=-9nlU3yDOEuxcj~DizC;XJqwUk}SqwR!e9&-MPrD{S&YqhS-h4sqU*`2yr zJ2&2|3u-Hox)ZC&r&{sbosS~k*{c?u3W!KeBvNx(`=ZLdxpZ#Y#yj2sd_*`&xhWV} zrve%%6iF>WDV}FgN)+2zpo`wYC%0U}$so1&C58Q3plf%3ko(2g(K~$bp5FeeE?D^m zSA_LhOxp@y+A;hd;CSF}=ypr3zY+M1%8n))8|j`725$It&JfSy7wFoxd=s_%{u?eu zjrzu$O?p$`lzfgzzO5$2G*>fjo7v$vb&gLtV!0jR!#tPh_VnnnXLFSqfDh-mNcv3| z(@Z`3gON?Ob2QQHZ`&LHge43k{_OA)`>IQD)m&}1bSVuJ{*GLVlfN_wQk-;SKFf4n zlGJl+RIKKF;JdZsS6whJl7+0G{wyPgxUi3x>hx1CCY8ovw(#McF+ICz^v6uZ#4dFv z1{SbP*C~7%E`KOi!|zy1yx8W|x;&>>1jp(k@?O*E?XL`4PTd^)eV=W(S$sI_YZ#}| zACE_U9riVLJ%7)xA0}$_KgSbA=p#I}W;v?5WU@n)wR8%;vD{v+Z}uaO{(6Q3?ZXDV zrK3i^g{a{R9VmrWBI=p23~?CA!_upS(}zA2m-%s*PVL2T=fk;6y95vz3ZGghJa^}qg|$gyo_ zjGx_k3qz8RZcdW3o^qy8cDVufrCp&eFJmpr>rGj~8rqx%TO~I(w@@$G4+lS{0YO*~ zaPUuI_Fr|uf<}5@7A;F2tPYt(7~C&JdG|wgd8_p_8nhZ`Q+qpB@nzFy<68m`<{(}G z?V|bJx%>=g`D>`RXj$1$tMx@5qc~FHz;s}{*XtNjWxJ>Fg*pg*-d}?&PZtvbEIk!f zjb*y&<|0HbPUo}%tnQ#>VbP-`1MA6jS(zMvD1$Xyi}>;)>MFL*r_FB9KKL&VAHACB zU0v{V2J2i*BiX2Y^kPGi9>O1uzMFQdB>*3to#+c^a{Asv>eZlm^_Q`s<70>u)!|~U zKpb=5CV8`4#k$njuXV^zLs~wZwRpIh(trq`lzTh{8v?c)1>w<)UP zuoTG5>vZP?u0wqNfhMdeJ0(vx*^V#Z_@Yl7_#k%tl+>Kvwd0A3_?in%@DA1~9QDx` z8mjIKsac~`p>V`?_CW~^VdfG&5S^NQC+AEMq|uI^U#l98jXvNTc;m0Sp!_Bm{ep1$ z?#TncdVoki_zSN6S6y)MCr;Il)!mg$Z0cRf@Jy8%-^ItP5YKNuoKxfJJ&iZxI)>VN z>veA)UC+JwUx6wur9nc0*|mSnT!z({59d@}{8SSX{Y0`pv-a`KSAHwP?B;`iUbp|M z3r0vRqzu!z_`Vd(u9fO*-z~+p6HFSa@=M9LF#`rNL`8JvC_k2OkNYA%n<-|yuv?6_ z7TVseIyvfjtigOdXI~TV)dd6MxPbm5;wF?K@AcRD1ZHI!4H3LU!YW+xZ%h8yC4LBL z{8bkm&E%wktfD72_dXkRmBTlnlvQ}laJ_m3Q45`I8`$*?dKCFBzEc>0p9}eLJ^*(w(3n!@%L)rC*E6I?IV$10L_^^VR!3pr zMm{@utv1{6AL7e?DA%=q%28uBX{hwgXi(556!_9c9Y1O#;?Heug5QiNVbIabc_h6p z03RKl4BA+w(Jy=(Mg49UW!{9M5-m_NrVax0W_-{tkuxlDBbu$eWx_viN4bS%k;KMna27T`!ZN?hDLj@hqj$Rb< z+G*S!KAex?puaSx;}7sN3D-(25_+J%_7hxy4`=!q1G`d*VNkpryQ6eAuCZM)Er5=BK&0vGK;u2kB9TaXXJ(gM<1NaEXcZzf1y`C|u zooo2&JD5LwILB$#US$^upIOrbqN85A1$$I7`_!vWb)i zyA;1FJnn6*z6zV_x@_zQ##HIsHWx9H-!zR0-{HN)j+HH||MqvRj(lkUbZOgGT`;tf V)X1Jp!NL< - +