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Adding integration test to cover using expressions with IDs (-E foo.ID)

This commit is contained in:
Eric Banks 2011-11-05 23:53:15 -04:00
parent fd09d92801
commit ad57bcd693
1 changed files with 8 additions and 0 deletions
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8
public/java/test/org/broadinstitute/sting/gatk/walkers/annotator/VariantAnnotatorIntegrationTest.java
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@ -124,6 +124,14 @@ public class VariantAnnotatorIntegrationTest extends WalkerTest {
executeTest("using expression", spec);
}
@Test
public void testUsingExpressionWithID() {
WalkerTestSpec spec = new WalkerTestSpec(
baseTestString() + " --resource:foo " + validationDataLocation + "targetAnnotations.vcf -G Standard --variant:VCF3 " + validationDataLocation + "vcfexample3empty.vcf -E foo.ID -L " + validationDataLocation + "vcfexample3empty.vcf", 1,
Arrays.asList("4a6f0675242f685e9072c1da5ad9e715"));
executeTest("using expression with ID", spec);
}
@Test
public void testTabixAnnotations() {
final String MD5 = "13269d5a2e16f06fd755cc0fb9271acf";