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corrected number of arguments passed to PbsEngineJobRunner when requesting multiple cores 

Signed-off-by: Khalid Shakir <kshakir@broadinstitute.org>
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Francesco 2013-06-27 11:08:59 +02:00 committed by Khalid Shakir
parent 948b2fca20
commit acf90ca027
1 changed files with 1 additions and 1 deletions
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2
public/scala/src/org/broadinstitute/sting/queue/engine/pbsengine/PbsEngineJobRunner.scala
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@ -66,7 +66,7 @@ class PbsEngineJobRunner(session: Session, function: CommandLineFunction) extend
logger.warn("Sending multicore job %s to farm without requesting appropriate number of cores (%d)".format( logger.warn("Sending multicore job %s to farm without requesting appropriate number of cores (%d)".format(
function.shortDescription, function.nCoresRequest.get)) function.shortDescription, function.nCoresRequest.get))
else else
nativeSpec += " -l nodes=1:ppn=%d".format(function.qSettings.parallelEnvironmentName, function.nCoresRequest.get) nativeSpec += " -l nodes=1:ppn=%d".format(function.nCoresRequest.get)
} }
// Pass on any job resource requests // Pass on any job resource requests