From acb4d477dabfec58a0848768fffb90c4ad32a257 Mon Sep 17 00:00:00 2001
From: asivache <asivache@348d0f76-0448-11de-a6fe-93d51630548a>
Date: Thu, 17 Dec 2009 01:03:01 +0000
Subject: [PATCH] sync...

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@2387 348d0f76-0448-11de-a6fe-93d51630548a
---
 .../sting/gatk/walkers/indels/IndelIntervalWalker.java           | 1 +
 1 file changed, 1 insertion(+)

diff --git a/java/src/org/broadinstitute/sting/gatk/walkers/indels/IndelIntervalWalker.java b/java/src/org/broadinstitute/sting/gatk/walkers/indels/IndelIntervalWalker.java
index 764e5452f..da15f91de 100644
--- a/java/src/org/broadinstitute/sting/gatk/walkers/indels/IndelIntervalWalker.java
+++ b/java/src/org/broadinstitute/sting/gatk/walkers/indels/IndelIntervalWalker.java
@@ -76,6 +76,7 @@ public class IndelIntervalWalker extends ReadWalker<IndelIntervalWalker.Interval
         GenomeLoc indelLoc = GenomeLocParser.createGenomeLoc(read.getReferenceIndex(), indelLeftEdge, indelRightEdge);
         GenomeLoc refLoc = GenomeLocParser.createGenomeLoc(read);
 
+ //       if ( indelLeftEdge == 10313124 || indelLeftEdge == 10313170 ) System.out.println("read: " +read.getReadName() + " ; " + refLoc + " ; " + indelLoc);
 
         return new Interval(refLoc, indelLoc);
     }