zzh
/
gatk-3.8
1
0
Fork 0
Code Issues Pull Requests Packages Projects Releases Wiki Activity

Corrected bug introduced in the last update and causing no families to be returned by getFamilies in case the samples were not specified

This commit is contained in:
Laurent Francioli 2011-11-29 11:18:15 +01:00
parent a09c01fcec
commit ab67011791
1 changed files with 1 additions and 1 deletions
Show Stats Download Patch File Download Diff File Expand all files Collapse all files

2
public/java/src/org/broadinstitute/sting/gatk/samples/SampleDB.java
View File

@ -156,7 +156,7 @@ public class SampleDB {
final Map<String, Set<Sample>> families = new TreeMap<String, Set<Sample>>();
for ( final Sample sample : samples.values() ) {
if(sampleIds != null && sampleIds.contains(sample.getID())){
if(sampleIds == null || sampleIds.contains(sample.getID())){
final String famID = sample.getFamilyID();
if ( famID != null ) {
if ( ! families.containsKey(famID) )