diff --git a/public/java/test/org/broadinstitute/sting/gatk/traversals/TraverseActiveRegionsUnitTest.java b/public/java/test/org/broadinstitute/sting/gatk/traversals/TraverseActiveRegionsUnitTest.java index 5051bc35f..0ec4f57f6 100644 --- a/public/java/test/org/broadinstitute/sting/gatk/traversals/TraverseActiveRegionsUnitTest.java +++ b/public/java/test/org/broadinstitute/sting/gatk/traversals/TraverseActiveRegionsUnitTest.java @@ -126,10 +126,10 @@ public class TraverseActiveRegionsUnitTest extends BaseTest { // TODO: reads which span many regions // TODO: reads which are partially between intervals (in/outside extension) // TODO: duplicate reads - + // TODO: read at the end of a contig // TODO: reads which are completely outside intervals but within extension // TODO: test the extension itself - + // TODO: unmapped reads intervals = new ArrayList(); intervals.add(genomeLocParser.createGenomeLoc("1", 10, 20));