From ab2a952ad1691e8018eeca258eaca37f32e13ad9 Mon Sep 17 00:00:00 2001
From: Laurent Francioli <laurent.francioli@gmail.com>
Date: Wed, 25 Apr 2012 16:51:16 +0200
Subject: [PATCH] PED support for Inbreeding Coefficient annotation

Signed-off-by: Eric Banks <ebanks@broadinstitute.org>
---
 .../gatk/walkers/annotator/VariantAnnotatorIntegrationTest.java | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/public/java/test/org/broadinstitute/sting/gatk/walkers/annotator/VariantAnnotatorIntegrationTest.java b/public/java/test/org/broadinstitute/sting/gatk/walkers/annotator/VariantAnnotatorIntegrationTest.java
index 497110641..7a0d78b88 100755
--- a/public/java/test/org/broadinstitute/sting/gatk/walkers/annotator/VariantAnnotatorIntegrationTest.java
+++ b/public/java/test/org/broadinstitute/sting/gatk/walkers/annotator/VariantAnnotatorIntegrationTest.java
@@ -184,7 +184,7 @@ public class VariantAnnotatorIntegrationTest extends WalkerTest {
                 "-T VariantAnnotator -R " + b37KGReference + " -A TransmissionDisequilibriumTest --variant:vcf " + validationDataLocation + "ug.random50000.subset300bp.chr1.family.vcf" +
                         " -L " + validationDataLocation + "ug.random50000.subset300bp.chr1.family.vcf -NO_HEADER -ped " + validationDataLocation + "ug.random50000.family.ped -o %s", 1,
                 Arrays.asList(MD5));
-        executeTest("Testing TDT annotation", spec);
+        executeTest("Testing TDT annotation ", spec);
     }