diff --git a/shell/firehose/pipelineTsvToYaml.sh b/shell/firehose/pipelineTsvToYaml.sh index 55fad225b..5fce320da 100755 --- a/shell/firehose/pipelineTsvToYaml.sh +++ b/shell/firehose/pipelineTsvToYaml.sh @@ -125,7 +125,7 @@ awk ' # add hg19 specific files to awk associative arrays genotypeDbsnps["Homo_sapiens_assembly19.fasta"] = dbsnpDir "dbsnp_132_b37.vcf" - evalDbsnps["Homo_sapiens_assembly19.fasta"] = dbsnpDir "dbsnp_129_b37.rod" + evalDbsnps["Homo_sapiens_assembly19.fasta"] = dbsnpDir "dbsnp_129_b37.vcf" refseqs["Homo_sapiens_assembly19.fasta"] = refseqDir "refGene-big-table-hg19.txt" printf "{"