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print percentage sign! 

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@745 348d0f76-0448-11de-a6fe-93d51630548a
This commit is contained in:
asivache 2009-05-18 14:38:20 +00:00
parent 9dec783a82
commit a39c8839c8
1 changed files with 3 additions and 3 deletions
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6
java/src/org/broadinstitute/sting/playground/utils/TrioConcordanceRecord.java
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@ -75,12 +75,12 @@ public class TrioConcordanceRecord {
public String toString() { public String toString() {
StringBuilder b = new StringBuilder(); StringBuilder b = new StringBuilder();
b.append(String.format("%ntotal assessed in trio: %d%n reference: %d (%3.2f)%n", assessed_loci, consistent_ref, Utils.percentage(consistent_ref,assessed_loci )) ); b.append(String.format("%ntotal assessed in trio: %d%n reference: %d (%3.2f%%)%n", assessed_loci, consistent_ref, Utils.percentage(consistent_ref,assessed_loci )) );
b.append(String.format(" total snp sites: %d%n consistent snp: %d (%3.2f)%n multiallelic snp: %d (%3.2f)%n inconsistent snp: %d (%3.2f)%n", b.append(String.format(" total snp sites: %d%n consistent snp: %d (%3.2f%%)%n multiallelic snp: %d (%3.2f%%)%n inconsistent snp: %d (%3.2f%%)%n",
totalSNP(), consistent_snp, Utils.percentage(consistent_snp,totalSNP() ), non_biallelic_snp, Utils.percentage(non_biallelic_snp,totalSNP()), totalSNP(), consistent_snp, Utils.percentage(consistent_snp,totalSNP() ), non_biallelic_snp, Utils.percentage(non_biallelic_snp,totalSNP()),
inconsistent_snp, Utils.percentage(inconsistent_snp, totalSNP()) ) ); inconsistent_snp, Utils.percentage(inconsistent_snp, totalSNP()) ) );
b.append(String.format(" total indel sites: %d%n consistent indel: %d (%3.2f)%n multiallelic indel: %d (%3.2f)%n inconsistent indels: %d (%3.2f)%n missing from daughter: %d (%3.2f)%n missing from both parents: %d (%3.2f)%n", b.append(String.format(" total indel sites: %d%n consistent indel: %d (%3.2f%%)%n multiallelic indel: %d (%3.2f%%)%n inconsistent indels: %d (%3.2f%%)%n missing from daughter: %d (%3.2f%%)%n missing from both parents: %d (%3.2f%%)%n",
totalIndels(), consistent_indels, Utils.percentage(consistent_indels,totalIndels()), totalIndels(), consistent_indels, Utils.percentage(consistent_indels,totalIndels()),
non_biallelic_indel, Utils.percentage(non_biallelic_indel, totalIndels()), non_biallelic_indel, Utils.percentage(non_biallelic_indel, totalIndels()),
inconsistent_indels, Utils.percentage(inconsistent_indels, totalIndels()), inconsistent_indels, Utils.percentage(inconsistent_indels, totalIndels()),