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Merge pull request #414 from broadinstitute/eb_update_dbsnp_in_bundle 

Update the dbsnp version in the bundle from 137 to 138; resolves PT #59771004.
This commit is contained in:
Eric Banks 2013-11-04 07:04:23 -08:00
parent cafcb34855 96024403bf
commit a372c0f074
1 changed files with 2 additions and 2 deletions
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4
public/scala/qscript/org/broadinstitute/sting/queue/qscripts/GATKResourcesBundle.scala
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@ -149,8 +149,8 @@ class GATKResourcesBundle extends QScript {
// //
// standard VCF files. Will be lifted to each reference // standard VCF files. Will be lifted to each reference
// //
addResource(new Resource("/humgen/gsa-hpprojects/GATK/data/Comparisons/Validated/dbSNP/dbsnp_137_b37.leftAligned.vcf", addResource(new Resource("/humgen/gsa-hpprojects/GATK/data/Comparisons/Validated/dbSNP/dbsnp_138_b37.leftAligned.vcf",
"dbsnp_137", b37, true, false)) "dbsnp_138", b37, true, false))
addResource(new Resource("/humgen/gsa-hpprojects/GATK/data/Comparisons/Validated/Omni2.5_chip/Omni25_sites_2141_samples.b37.vcf", addResource(new Resource("/humgen/gsa-hpprojects/GATK/data/Comparisons/Validated/Omni2.5_chip/Omni25_sites_2141_samples.b37.vcf",
"1000G_omni2.5", b37, true, false)) "1000G_omni2.5", b37, true, false))