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Merge pull request #2 from jsilter/master 

Abstract connection to MongoDB so we can specify it through JSON file
This commit is contained in:
droazen 2012-11-28 12:05:47 -08:00
parent c76c808268 26d9c41615
commit a359d43f54
1 changed files with 11 additions and 4 deletions
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15
build.xml
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@ -226,10 +226,17 @@
<!-- the path for resources that need to go into the GATK jar; <!-- the path for resources that need to go into the GATK jar;
any additional resources should go into this set. --> any additional resources should go into this set. -->
<path id="gatk.resources"> <path id="gatk.resources">
<fileset dir="${basedir}"> <fileset dir="${java.public.source.dir}">
<include name="${java.public.source.dir}/**/templates/*" /> <include name="**/resources/*" />
<include name="${java.private.source.dir}/**/templates/*" if="include.private" /> <include name="**/templates/*" />
<include name="${java.protected.source.dir}/**/templates/*" if="include.protected" /> </fileset>
<fileset dir="${java.private.source.dir}" erroronmissingdir="false">
<include name="**/resources/*" if="include.private" />
<include name="**/templates/*" if="include.private" />
</fileset>
<fileset dir="${java.protected.source.dir}" erroronmissingdir="false">
<include name="**/resources/*" if="include.protected" />
<include name="**/templates/*" if="include.protected" />
</fileset> </fileset>
</path> </path>