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Removed unused column 

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@3285 348d0f76-0448-11de-a6fe-93d51630548a
This commit is contained in:
weisburd 2010-04-30 21:29:34 +00:00
parent 9dff578706
commit a318b1871d
1 changed files with 0 additions and 2 deletions
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2
java/src/org/broadinstitute/sting/playground/gatk/walkers/annotator/TranscriptToInfo.java
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@ -81,7 +81,6 @@ public class TranscriptToInfo extends RodWalker<TreeMap<String, String>, TreeMap
public static final String OUTPUT_POSITION_TYPE = "positionType"; //eg. utr5, cds, utr3, intron, intergenic public static final String OUTPUT_POSITION_TYPE = "positionType"; //eg. utr5, cds, utr3, intron, intergenic
public static final String OUTPUT_MRNA_COORD = "mrnaCoord"; //1-based offset within the transcript public static final String OUTPUT_MRNA_COORD = "mrnaCoord"; //1-based offset within the transcript
public static final String OUTPUT_CODING_COORD = "codingCoord"; //1-based offset within the cds region
public static final String OUTPUT_SPLICE_DISTANCE = "spliceDist"; //eg. integer, bp to nearest exon/intron boundary public static final String OUTPUT_SPLICE_DISTANCE = "spliceDist"; //eg. integer, bp to nearest exon/intron boundary
@ -117,7 +116,6 @@ public class TranscriptToInfo extends RodWalker<TreeMap<String, String>, TreeMap
OUTPUT_FRAME, OUTPUT_FRAME,
OUTPUT_MRNA_COORD, OUTPUT_MRNA_COORD,
OUTPUT_CODING_COORD,
OUTPUT_CODON_NUMBER, OUTPUT_CODON_NUMBER,
OUTPUT_SPLICE_DISTANCE, OUTPUT_SPLICE_DISTANCE,