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gatk-3.8
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Removed RepairBadlyCombinedSamFile jar target. 

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@359 348d0f76-0448-11de-a6fe-93d51630548a
This commit is contained in:
kiran 2009-04-10 04:21:19 +00:00
parent 2b59110dca
commit a2a38a4bbb
1 changed files with 17 additions and 0 deletions
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17
build.xml
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@ -111,6 +111,17 @@
</manifest>
</jar>
<jar jarfile="dist/CombineSamAndFourProbs.jar" whenmanifestonly="skip">
<!--<fileset dir="build" includes="**/fourbasecaller/**/*.class" />-->
<fileset dir="build">
<include name="**/fourbasecaller/**/*.class" />
<include name="**/illumina/**/*.class" />
</fileset>
<manifest>
<attribute name="Main-Class" value="org.broadinstitute.sting.playground.fourbasecaller.CombineSamAndFourProbs" />
</manifest>
</jar>
<jar jarfile="dist/Playground.jar" whenmanifestonly="skip">
<fileset dir="build">
<include name="**/*.class"/>
@ -143,6 +154,12 @@
</manifest>
</jar>
<jar jarfile="dist/CombineSamAndFourProbs.jar" update="true" whenmanifestonly="skip">
<manifest>
<attribute name="Class-Path" value="${jar.classpath}" />
</manifest>
</jar>
<jar jarfile="dist/Playground.jar" update="true" whenmanifestonly="skip">
<manifest>
<attribute name="Class-Path" value="${jar.classpath}"/>