diff --git a/public/java/src/org/broadinstitute/sting/gatk/samples/Sample.java b/public/java/src/org/broadinstitute/sting/gatk/samples/Sample.java index 3e61e03d9..d57668715 100644 --- a/public/java/src/org/broadinstitute/sting/gatk/samples/Sample.java +++ b/public/java/src/org/broadinstitute/sting/gatk/samples/Sample.java @@ -3,7 +3,6 @@ package org.broadinstitute.sting.gatk.samples; import org.broadinstitute.sting.utils.exceptions.UserException; -import java.util.Collections; import java.util.HashMap; import java.util.Map; diff --git a/public/java/src/org/broadinstitute/sting/gatk/samples/SampleDB.java b/public/java/src/org/broadinstitute/sting/gatk/samples/SampleDB.java index 9abc28517..4bcf3c938 100644 --- a/public/java/src/org/broadinstitute/sting/gatk/samples/SampleDB.java +++ b/public/java/src/org/broadinstitute/sting/gatk/samples/SampleDB.java @@ -1,13 +1,10 @@ package org.broadinstitute.sting.gatk.samples; -import net.sf.samtools.SAMFileHeader; import net.sf.samtools.SAMReadGroupRecord; import net.sf.samtools.SAMRecord; -import org.broadinstitute.sting.utils.SampleUtils; import org.broadinstitute.sting.utils.exceptions.StingException; import org.broadinstitute.sting.utils.variantcontext.Genotype; -import java.io.File; import java.util.*; /** diff --git a/public/java/src/org/broadinstitute/sting/gatk/samples/SampleDBBuilder.java b/public/java/src/org/broadinstitute/sting/gatk/samples/SampleDBBuilder.java index 87733d1f6..807b150b2 100644 --- a/public/java/src/org/broadinstitute/sting/gatk/samples/SampleDBBuilder.java +++ b/public/java/src/org/broadinstitute/sting/gatk/samples/SampleDBBuilder.java @@ -25,13 +25,9 @@ package org.broadinstitute.sting.gatk.samples; import net.sf.samtools.SAMFileHeader; -import net.sf.samtools.SAMReadGroupRecord; -import net.sf.samtools.SAMRecord; import org.broadinstitute.sting.gatk.GenomeAnalysisEngine; import org.broadinstitute.sting.utils.SampleUtils; -import org.broadinstitute.sting.utils.exceptions.StingException; import org.broadinstitute.sting.utils.exceptions.UserException; -import org.broadinstitute.sting.utils.variantcontext.Genotype; import java.io.File; import java.io.FileNotFoundException; diff --git a/public/java/test/org/broadinstitute/sting/gatk/samples/SampleDBUnitTest.java b/public/java/test/org/broadinstitute/sting/gatk/samples/SampleDBUnitTest.java index f6d3b42b8..b6b4fab54 100644 --- a/public/java/test/org/broadinstitute/sting/gatk/samples/SampleDBUnitTest.java +++ b/public/java/test/org/broadinstitute/sting/gatk/samples/SampleDBUnitTest.java @@ -2,8 +2,6 @@ package org.broadinstitute.sting.gatk.samples; import net.sf.samtools.SAMFileHeader; import org.broadinstitute.sting.BaseTest; - -import org.broadinstitute.sting.gatk.GenomeAnalysisEngine; import org.broadinstitute.sting.utils.exceptions.UserException; import org.broadinstitute.sting.utils.sam.ArtificialSAMUtils; import org.testng.Assert; @@ -11,7 +9,9 @@ import org.testng.annotations.BeforeMethod; import org.testng.annotations.Test; import java.io.File; -import java.util.*; +import java.util.Arrays; +import java.util.HashSet; +import java.util.Set; /** * Created by IntelliJ IDEA. diff --git a/public/java/test/org/broadinstitute/sting/gatk/samples/SampleUnitTest.java b/public/java/test/org/broadinstitute/sting/gatk/samples/SampleUnitTest.java index c2c9d77c6..bc8a98c22 100644 --- a/public/java/test/org/broadinstitute/sting/gatk/samples/SampleUnitTest.java +++ b/public/java/test/org/broadinstitute/sting/gatk/samples/SampleUnitTest.java @@ -1,8 +1,7 @@ package org.broadinstitute.sting.gatk.samples; -import org.testng.Assert; import org.broadinstitute.sting.BaseTest; - +import org.testng.Assert; import org.testng.annotations.BeforeClass; import org.testng.annotations.Test;