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Cleaned up imports

This commit is contained in:
Mark DePristo 2011-10-04 06:28:36 -07:00
parent b20689ff55
commit a27641e1fc
5 changed files with 4 additions and 13 deletions
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1
public/java/src/org/broadinstitute/sting/gatk/samples/Sample.java
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@ -3,7 +3,6 @@ package org.broadinstitute.sting.gatk.samples;
import org.broadinstitute.sting.utils.exceptions.UserException;
import java.util.Collections;
import java.util.HashMap;
import java.util.Map;

3
public/java/src/org/broadinstitute/sting/gatk/samples/SampleDB.java
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@ -1,13 +1,10 @@
package org.broadinstitute.sting.gatk.samples;
import net.sf.samtools.SAMFileHeader;
import net.sf.samtools.SAMReadGroupRecord;
import net.sf.samtools.SAMRecord;
import org.broadinstitute.sting.utils.SampleUtils;
import org.broadinstitute.sting.utils.exceptions.StingException;
import org.broadinstitute.sting.utils.variantcontext.Genotype;
import java.io.File;
import java.util.*;
/**

4
public/java/src/org/broadinstitute/sting/gatk/samples/SampleDBBuilder.java
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@ -25,13 +25,9 @@
package org.broadinstitute.sting.gatk.samples;
import net.sf.samtools.SAMFileHeader;
import net.sf.samtools.SAMReadGroupRecord;
import net.sf.samtools.SAMRecord;
import org.broadinstitute.sting.gatk.GenomeAnalysisEngine;
import org.broadinstitute.sting.utils.SampleUtils;
import org.broadinstitute.sting.utils.exceptions.StingException;
import org.broadinstitute.sting.utils.exceptions.UserException;
import org.broadinstitute.sting.utils.variantcontext.Genotype;
import java.io.File;
import java.io.FileNotFoundException;

6
public/java/test/org/broadinstitute/sting/gatk/samples/SampleDBUnitTest.java
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@ -2,8 +2,6 @@ package org.broadinstitute.sting.gatk.samples;
import net.sf.samtools.SAMFileHeader;
import org.broadinstitute.sting.BaseTest;
import org.broadinstitute.sting.gatk.GenomeAnalysisEngine;
import org.broadinstitute.sting.utils.exceptions.UserException;
import org.broadinstitute.sting.utils.sam.ArtificialSAMUtils;
import org.testng.Assert;
@ -11,7 +9,9 @@ import org.testng.annotations.BeforeMethod;
import org.testng.annotations.Test;
import java.io.File;
import java.util.*;
import java.util.Arrays;
import java.util.HashSet;
import java.util.Set;
/**
* Created by IntelliJ IDEA.

3
public/java/test/org/broadinstitute/sting/gatk/samples/SampleUnitTest.java
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@ -1,8 +1,7 @@
package org.broadinstitute.sting.gatk.samples;
import org.testng.Assert;
import org.broadinstitute.sting.BaseTest;
import org.testng.Assert;
import org.testng.annotations.BeforeClass;
import org.testng.annotations.Test;