diff --git a/java/src/org/broadinstitute/sting/utils/exceptions/UserException.java b/java/src/org/broadinstitute/sting/utils/exceptions/UserException.java index f9902035d..146bf75bd 100755 --- a/java/src/org/broadinstitute/sting/utils/exceptions/UserException.java +++ b/java/src/org/broadinstitute/sting/utils/exceptions/UserException.java @@ -118,7 +118,7 @@ public class UserException extends ReviewedStingException { public static class ReadMissingReadGroup extends MalformedBam { public ReadMissingReadGroup(SAMRecord read) { - super(read, String.format("Read %s is missing the read group, which is required by the GATK", read.getReadName())); + super(read, String.format("Read %s is either missing the read group or its read group is not defined in the BAM header, both of which are required by the GATK", read.getReadName())); } }