PostCallingQC and variantCallQC.R vastly improved
-- All new IndelSummary features used by default with variantCallQC.R script with PostCallingQC.scala -- This includes many new per sample and per AC indel QC metrics. -- Better plotting style throughout, with nice histograms, white backgrounds, etc -- PostCallingQC is super easy to use now, just give it --evalvcfs and go. Tell it to run with 8 threads to finish quick. It's really easy and produces beautiful new figures (will replace with one attached)
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