From a0464633fd343298935049f2635c5229d2c637ab Mon Sep 17 00:00:00 2001
From: kiran <kiran@348d0f76-0448-11de-a6fe-93d51630548a>
Date: Sun, 17 May 2009 03:42:25 +0000
Subject: [PATCH] Whoops.  Changed denominator from reads to bases.

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@734 348d0f76-0448-11de-a6fe-93d51630548a
---
 .../broadinstitute/sting/secondarybase/BasecallingStats.java    | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/java/src/org/broadinstitute/sting/secondarybase/BasecallingStats.java b/java/src/org/broadinstitute/sting/secondarybase/BasecallingStats.java
index 8a2dfabd4..a1edf0bb7 100755
--- a/java/src/org/broadinstitute/sting/secondarybase/BasecallingStats.java
+++ b/java/src/org/broadinstitute/sting/secondarybase/BasecallingStats.java
@@ -51,7 +51,7 @@ public class BasecallingStats {
      * @return the percent of bases called consistently
      */
     public double getPercentConsistent() {
-        return ((double) getBasesConsistent())/((double) getReadsTotal());
+        return ((double) getBasesConsistent())/((double) getBasesTotal());
     }
 
     /**