From 9ec393bfce95355ddcc9c07e86340abcf7c7207f Mon Sep 17 00:00:00 2001 From: weisburd Date: Fri, 2 Jul 2010 21:02:09 +0000 Subject: [PATCH] Updated md5 - vcf header line change git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@3714 348d0f76-0448-11de-a6fe-93d51630548a --- .../walkers/annotator/GenomicAnnotatorIntegrationTest.java | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/java/test/org/broadinstitute/sting/playground/gatk/walkers/annotator/GenomicAnnotatorIntegrationTest.java b/java/test/org/broadinstitute/sting/playground/gatk/walkers/annotator/GenomicAnnotatorIntegrationTest.java index 4b1346209..3ef58601d 100755 --- a/java/test/org/broadinstitute/sting/playground/gatk/walkers/annotator/GenomicAnnotatorIntegrationTest.java +++ b/java/test/org/broadinstitute/sting/playground/gatk/walkers/annotator/GenomicAnnotatorIntegrationTest.java @@ -26,7 +26,7 @@ public class GenomicAnnotatorIntegrationTest extends WalkerTest { */ - String[] md5WithDashSArg = {"35dffbdb99dbf480f4bc5169219bcfc1"}; + String[] md5WithDashSArg = {"a1bd36fc69a3cdd3a08d951730b1d7be"}; WalkerTestSpec specWithSArg = new WalkerTestSpec( "-T GenomicAnnotator -R " + oneKGLocation + "reference/human_b36_both.fasta " + "-B variant,vcf,/humgen/gsa-hpprojects/GATK/data/Annotations/examples/CEU_hapmap_nogt_23_subset.vcf " + @@ -37,7 +37,7 @@ public class GenomicAnnotatorIntegrationTest extends WalkerTest { "-s dbsnp.name,dbsnp.refUCSC,dbsnp.strand,dbsnp.observed,dbsnp.avHet", 1, Arrays.asList(md5WithDashSArg)); - //executeTest("test with dbSNP and -s arg", specWithSArg); + executeTest("test with dbSNP and -s arg", specWithSArg); } }