From 9d598f1c8294b3a0ea1cfc0524e95be73e556f48 Mon Sep 17 00:00:00 2001
From: aaron <aaron@348d0f76-0448-11de-a6fe-93d51630548a>
Date: Wed, 2 Dec 2009 21:11:02 +0000
Subject: [PATCH] some integration test clean-up

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@2229 348d0f76-0448-11de-a6fe-93d51630548a
---
 .../gatk/walkers/ClipReadsWalkersIntegrationTest.java       | 6 ++----
 1 file changed, 2 insertions(+), 4 deletions(-)

diff --git a/java/test/org/broadinstitute/sting/playground/gatk/walkers/ClipReadsWalkersIntegrationTest.java b/java/test/org/broadinstitute/sting/playground/gatk/walkers/ClipReadsWalkersIntegrationTest.java
index 4cde739d7..49bb1578c 100755
--- a/java/test/org/broadinstitute/sting/playground/gatk/walkers/ClipReadsWalkersIntegrationTest.java
+++ b/java/test/org/broadinstitute/sting/playground/gatk/walkers/ClipReadsWalkersIntegrationTest.java
@@ -3,16 +3,14 @@ package org.broadinstitute.sting.playground.gatk.walkers;
 import org.broadinstitute.sting.WalkerTest;
 import org.junit.Test;
 
-import java.util.HashMap;
-import java.util.Map;
+import java.io.File;
 import java.util.Arrays;
 import java.util.List;
-import java.io.File;
 
 public class ClipReadsWalkersIntegrationTest extends WalkerTest {
     public void testClipper(String name, String args, String md51, String md52) {
         WalkerTestSpec spec = new WalkerTestSpec(
-                "-R /home/radon01/depristo/work/humanref/Homo_sapiens_assembly18.fasta " +
+                "-R /seq/references/Homo_sapiens_assembly18/v0/Homo_sapiens_assembly18.fasta " +
                         "-T ClipReads " +
                         "-I /humgen/gsa-scr1/GATK_Data/Validation_Data/clippingReadsTest.bam " +
                         "-o %s " +