From 9b9856ead5dca38c9378095e9465d0b353a9346a Mon Sep 17 00:00:00 2001
From: Eric Banks <ebanks@broadinstitute.org>
Date: Tue, 13 Mar 2012 09:28:11 -0400
Subject: [PATCH] quick todo for next time we make a bundle

---
 .../sting/queue/qscripts/GATKResourcesBundle.scala               | 1 +
 1 file changed, 1 insertion(+)

diff --git a/public/scala/qscript/org/broadinstitute/sting/queue/qscripts/GATKResourcesBundle.scala b/public/scala/qscript/org/broadinstitute/sting/queue/qscripts/GATKResourcesBundle.scala
index 804e50421..7d4771c4b 100755
--- a/public/scala/qscript/org/broadinstitute/sting/queue/qscripts/GATKResourcesBundle.scala
+++ b/public/scala/qscript/org/broadinstitute/sting/queue/qscripts/GATKResourcesBundle.scala
@@ -242,6 +242,7 @@ class GATKResourcesBundle extends QScript {
 
   def createDownloadsFromBundle(in: File, out: File) {
     Console.printf("Visiting %s%n", in)
+    // todo -- ignore some of the other files too (e.g. *.out); will test next time we make a bundle
     if (! in.getName.startsWith(".")) {
       if ( in.isDirectory ) {
         out.mkdirs