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Merged bug fix from Stable into Unstable

This commit is contained in:
Matt Hanna 2011-10-05 18:27:29 -04:00
parent be2d29ce69 dd780dba5f
commit 982983355f
1 changed files with 4 additions and 6 deletions
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10
build.xml
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@ -547,12 +547,10 @@
<target name="vcf.jar" depends="gatk.compile,init.jar"> <target name="vcf.jar" depends="gatk.compile,init.jar">
<jar jarfile="${dist.dir}/vcf.jar"> <jar jarfile="${dist.dir}/vcf.jar">
<fileset dir="${java.classes}"> <classfileset dir="${java.classes}">
<include name="**/utils/codecs/**/*.class"/> <rootfileset dir="${java.classes}" includes="org/broadinstitute/sting/utils/codecs/vcf/**/*.class" />
<include name="**/utils/variantcontext/**/*.class"/> <rootfileset dir="${java.classes}" includes="org/broadinstitute/sting/utils/variantcontext/**/*.class" />
<include name="org/broadinstitute/sting/utils/exceptions/**"/> </classfileset>
<include name="org/broadinstitute/sting/utils/help/DocumentedGATKFeature.class"/>
</fileset>
</jar> </jar>
</target> </target>