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I meant for default lod threshold to be 5.0, not 0.0. 

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@507 348d0f76-0448-11de-a6fe-93d51630548a
This commit is contained in:
kiran 2009-04-23 17:46:08 +00:00
parent ca66cccd2f
commit 96db1477d4
1 changed files with 1 additions and 1 deletions
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2
java/src/org/broadinstitute/sting/playground/gatk/walkers/SingleSampleGenotyper.java
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@ -21,7 +21,7 @@ public class SingleSampleGenotyper extends LocusWalker<AlleleFrequencyEstimate,
@Argument(fullName="metrics",required=true)
public String metricsFileName;
@Argument(fullName="lodThreshold",shortName="lod",required=false,defaultValue="0.0")
@Argument(fullName="lodThreshold",shortName="lod",required=false,defaultValue="5.0")
public Double lodThreshold;
@Argument(fullName="fourBaseMode",required=false,defaultValue="false")